PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01690.1.g00010.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 183aa    MW: 19961.8 Da    PI: 10.2185
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01690.1.g00010.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.7e-162271355
                           AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  + GVr ++ +g+++AeIrd    + k +r++lg+f+t+e Aa a+++a+ + +g
  Zpz_sc01690.1.g00010.1.sm.mk 22 FIGVRSRP-WGKFAAEIRDsT--R-KGARVWLGTFDTPEAAALAYDQAAFSARG 71
                                  67***999.**********32..2.24***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.1E-312185IPR001471AP2/ERF domain
PROSITE profilePS5103221.1932179IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-282280IPR001471AP2/ERF domain
CDDcd000183.62E-172280No hitNo description
SuperFamilySSF541715.43E-212281IPR016177DNA-binding domain
PRINTSPR003672.3E-82233IPR001471AP2/ERF domain
PfamPF008476.1E-122371IPR001471AP2/ERF domain
PRINTSPR003672.3E-84561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MVQPCEEASS TIKNKTKPPQ PFIGVRSRPW GKFAAEIRDS TRKGARVWLG TFDTPEAAAL  60
AYDQAAFSAR GASAVLNFPV ECVQESLRPL ALSDATGGSP VLALKRRHSK RTRRSKLSPN  120
SINVLRPQRR RPRQCSGGKG NITAVVVAQQ LETPACPFGA VELDDLGADY LDELLRLSSE  180
LEF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A5e-242082466ATERF1
2gcc_A5e-242082466ATERF1
1gcc_A5e-242082163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004979115.14e-49PREDICTED: ethylene-responsive transcription factor ERF094-like
TrEMBLM7ZJD62e-49M7ZJD6_TRIUA; Ethylene-responsive transcription factor 1B
TrEMBLW5DYP42e-49W5DYP4_WHEAT; Uncharacterized protein
STRINGSi033089m4e-48(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-36ethylene response factor 1